Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.45□□□□□ -0.1
UPK1AO00322 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 UGT1A2P-201ENST00000454886 866 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 INGX-202ENST00000489074 768 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.45□□□□□ -0.1
UPK1AO00322 AC023310.3-201ENST00000557027 670 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 AC100756.1-201ENST00000562736 682 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 RARRES2P5-201ENST00000564013 466 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 AC138749.3-201ENST00000567691 622 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 AC116165.1-201ENST00000611806 668 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1AO00322 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1AO00322 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 MBLAC2-202ENST00000514906 1936 ntBASIC14.45□□□□□ -0.1
UPK1AO00322 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UPK1AO00322 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 AC152010.1-201ENST00000415779 2006 ntBASIC14.44□□□□□ -0.1
UPK1AO00322 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 AC015656.1-201ENST00000624209 3578 ntBASIC14.44□□□□□ -0.1
UPK1AO00322 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 MIR770-201ENST00000390219 98 ntBASIC14.44□□□□□ -0.1
UPK1AO00322 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.44□□□□□ -0.1
UPK1AO00322 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 TPRX2P-201ENST00000535362 881 ntBASIC14.44□□□□□ -0.1
UPK1AO00322 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
UPK1AO00322 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.44□□□□□ -0.1
UPK1AO00322 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1AO00322 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1AO00322 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1AO00322 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 AC018442.1-201ENST00000421439 2061 ntBASIC14.43□□□□□ -0.1
UPK1AO00322 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.43□□□□□ -0.1
UPK1AO00322 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 551.4 ms