Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC005695.3-201ENST00000614522 232 ntBASIC15.1■□□□□ 0.01
TLR4O00206 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 AP003680.1-201ENST00000598970 3660 ntBASIC15.1■□□□□ 0.01
TLR4O00206 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TLR4O00206 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 PRAL-201ENST00000624952 3286 ntBASIC15.09■□□□□ 0.01
TLR4O00206 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TLR4O00206 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.09■□□□□ 0.01
TLR4O00206 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TLR4O00206 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.09■□□□□ 0.01
TLR4O00206 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.09■□□□□ 0.01
TLR4O00206 CNN2P10-201ENST00000443067 918 ntBASIC15.09■□□□□ 0.01
TLR4O00206 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.09■□□□□ 0.01
TLR4O00206 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.09■□□□□ 0.01
TLR4O00206 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.09■□□□□ 0.01
TLR4O00206 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.09■□□□□ 0.01
TLR4O00206 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 AC244452.3-201ENST00000636814 210 ntBASIC15.09■□□□□ 0.01
TLR4O00206 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TLR4O00206 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TLR4O00206 KRT8P14-201ENST00000414254 1442 ntBASIC15.09■□□□□ 0.01
TLR4O00206 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TLR4O00206 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.08■□□□□ 0.01
TLR4O00206 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TLR4O00206 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TLR4O00206 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TLR4O00206 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.08■□□□□ 0
TLR4O00206 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.08■□□□□ 0
TLR4O00206 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TLR4O00206 CALR4P-201ENST00000431943 946 ntBASIC15.08■□□□□ 0
TLR4O00206 AC004898.1-201ENST00000451057 766 ntBASIC15.08■□□□□ 0
TLR4O00206 AP006547.1-201ENST00000563435 692 ntBASIC15.08■□□□□ 0
TLR4O00206 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TLR4O00206 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 AL645728.2-202ENST00000641679 227 ntBASIC15.08■□□□□ 0
TLR4O00206 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.08■□□□□ 0
TLR4O00206 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.08■□□□□ 0
TLR4O00206 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TLR4O00206 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TLR4O00206 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TLR4O00206 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.08■□□□□ 0
TLR4O00206 AC127383.1-201ENST00000444697 1800 ntBASIC15.08■□□□□ 0
TLR4O00206 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms