Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LSINCT5-201ENST00000626215 2647 ntBASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TOP3BP1-201ENST00000420768 1380 ntBASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC005521.1-201ENST00000393351 872 ntBASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 STARP1-201ENST00000397973 869 ntBASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SPDYE15P-201ENST00000424157 909 ntBASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AL645939.2-201ENST00000427340 991 ntBASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.31□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 KRT18P48-201ENST00000434763 852 ntBASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 KRT18P57-201ENST00000443599 1254 ntBASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 HOMER2P1-201ENST00000455653 964 ntBASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC011558.1-201ENST00000623459 338 ntBASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 PCDHA6-201ENST00000378126 3267 ntBASIC13.3□□□□□ -0.28
BOLA2-SMG1P6H3BVE0 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms