Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00473A8K010 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MIR600HG-201ENST00000449175 5984 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MIR943-201ENST00000401286 94 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00473A8K010 AC241585.1-201ENST00000433527 519 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00473A8K010 AL589987.1-201ENST00000453380 819 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MEIS3P1-201ENST00000495167 958 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 SPDYE18-201ENST00000510091 1050 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 AC009407.1-201ENST00000568958 598 ntBASIC12.42□□□□□ -0.42
LINC00473A8K010 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00473A8K010 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00473A8K010 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.42□□□□□ -0.42
LINC00473A8K010 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
LINC00473A8K010 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.42□□□□□ -0.42
LINC00473A8K010 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LINC00473A8K010 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00473A8K010 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LINC00473A8K010 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LINC00473A8K010 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00473A8K010 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00473A8K010 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00473A8K010 BTBD7P1-201ENST00000447253 1453 ntBASIC12.41□□□□□ -0.42
LINC00473A8K010 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
LINC00473A8K010 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00473A8K010 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00473A8K010 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00473A8K010 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00473A8K010 IGHV3-42-201ENST00000520410 361 ntBASIC12.41□□□□□ -0.42
LINC00473A8K010 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00473A8K010 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00473A8K010 AP001160.2-201ENST00000596071 487 ntBASIC12.41□□□□□ -0.42
LINC00473A8K010 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC00473A8K010 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00473A8K010 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00473A8K010 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms