Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
MBD3L3A6NE82 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.26□□□□□ -0.29
MBD3L3A6NE82 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
MBD3L3A6NE82 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L3A6NE82 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MBD3L3A6NE82 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.26□□□□□ -0.29
MBD3L3A6NE82 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC007950.2-201ENST00000615045 2347 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SLC25A24P2-201ENST00000415059 510 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AL008707.1-201ENST00000422498 534 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC016700.1-201ENST00000429424 312 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC106794.1-201ENST00000506935 792 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC100827.2-201ENST00000563214 1194 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 DUX4L46-201ENST00000566845 751 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 NDUFV2P1-201ENST00000596415 907 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 BNIP3P13-201ENST00000599968 566 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC023090.2-201ENST00000625182 2110 ntBASIC13.25□□□□□ -0.29
MBD3L3A6NE82 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MBD3L3A6NE82 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.24□□□□□ -0.29
MBD3L3A6NE82 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 REXO1L2P-201ENST00000425429 2069 ntBASIC13.24□□□□□ -0.29
MBD3L3A6NE82 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 DPM3-202ENST00000368399 517 ntBASIC13.24□□□□□ -0.29
MBD3L3A6NE82 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 AC005077.2-201ENST00000449786 690 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms