Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CCDC66A2RUB6 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC66A2RUB6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 MIR574-201ENST00000385209 96 ntBASIC16.64■□□□□ 0.25
CCDC66A2RUB6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
CCDC66A2RUB6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 KRT8P23-201ENST00000560090 1207 ntBASIC16.64■□□□□ 0.25
CCDC66A2RUB6 AC026979.3-201ENST00000607315 403 ntBASIC16.64■□□□□ 0.25
CCDC66A2RUB6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC66A2RUB6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SPCS2P4-201ENST00000436160 681 ntBASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SPDYE11-202ENST00000450699 704 ntBASIC16.63■□□□□ 0.25
CCDC66A2RUB6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SPDYE9P-201ENST00000570642 692 ntBASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 AC026120.1-201ENST00000611536 926 ntBASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SPDYE10P-202ENST00000612005 668 ntBASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SPDYE8P-202ENST00000612377 668 ntBASIC16.63■□□□□ 0.25
CCDC66A2RUB6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC66A2RUB6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCDC66A2RUB6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms