Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TARDBPP1-201ENST00000442013 1203 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RN7SL399P-201ENST00000471648 279 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IGHV3-71-201ENST00000523324 359 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MIR8072-201ENST00000614241 80 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL033527.5-201ENST00000641382 801 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FGD5P1-202ENST00000614866 2498 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZBED1P1-201ENST00000502364 1930 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LINC00528-201ENST00000600723 2160 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RPL5P21-201ENST00000404620 815 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC098850.1-201ENST00000419919 790 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RN7SL837P-201ENST00000463010 287 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC232323.1-201ENST00000540724 2099 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 REXO1L5P-201ENST00000622260 2098 ntBASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms