Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 KRT18P64-201ENST00000434946 1219 ntBASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AC079781.3-201ENST00000449110 356 ntBASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 SAMD11P1-201ENST00000571429 661 ntBASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 SBF1P1-201ENST00000444527 5631 ntBASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.26□□□□□ -0.13
TCRBV3S1A0A5B6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 AL365209.1-201ENST00000624418 6473 ntBASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 CICP16-201ENST00000502609 2813 ntBASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 AC105021.1-202ENST00000570572 669 ntBASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 NUTM2HP-201ENST00000442076 2498 ntBASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 AC073548.1-201ENST00000624088 1882 ntBASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV3S1A0A5B6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TCRBV3S1A0A5B6 ST20-AS1-201ENST00000560255 4223 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms