Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM27A0A1W2PRY6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM27A0A1W2PRY6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM27A0A1W2PRY6 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AL356488.2-201ENST00000602755 427 ntBASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AC005593.1-201ENST00000624894 515 ntBASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AC118758.2-201ENST00000614242 2813 ntBASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 AC018665.1-201ENST00000622927 1362 ntBASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM27A0A1W2PRY6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 CES1P1-201ENST00000421606 1704 ntBASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 AC140658.5-201ENST00000438532 169 ntBASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 OR7E14P-202ENST00000530490 1290 ntBASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 NPAP1P7-201ENST00000613027 823 ntBASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM27A0A1W2PRY6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms