Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC244452.3-201ENST00000636814 210 ntBASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 KRT8P35-201ENST00000483942 1338 ntBASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 AL138709.1-201ENST00000614840 1693 ntBASIC14.3□□□□□ -0.12
PCDHGA9Q9Y5G4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC136621.1-201ENST00000624017 2304 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC092506.1-202ENST00000401022 528 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC104306.2-201ENST00000451877 341 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 RNA5SP486-201ENST00000515961 83 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AC145423.3-201ENST00000615987 467 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AL138799.1-201ENST00000448213 1675 ntBASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.29□□□□□ -0.12
PCDHGA9Q9Y5G4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCDHGA9Q9Y5G4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms