Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 FAM207CP-201ENST00000443486 507 ntBASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 DOC2GP-202ENST00000514950 1163 ntBASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 RARRES2P5-201ENST00000564013 466 ntBASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AC000095.1-201ENST00000603208 874 ntBASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AL121723.1-201ENST00000445194 1519 ntBASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 AC084364.1-201ENST00000551967 1556 ntBASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAPPC4Q9Y296 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 BCRP1-201ENST00000444246 691 ntBASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 TSPY16P-201ENST00000449843 468 ntBASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 AC104794.3-201ENST00000566840 1248 ntBASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 RRP7BP-205ENST00000566851 833 ntBASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 AC007326.2-201ENST00000624224 7579 ntBASIC14.03□□□□□ -0.16
TRAPPC4Q9Y296 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAPPC4Q9Y296 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms