Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 DNM1P48-201ENST00000419538 439 ntBASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 AC004910.1-201ENST00000433493 787 ntBASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 BRD7P5-201ENST00000299197 1822 ntBASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RIMBP3Q9UFD9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 OR52M2P-201ENST00000414298 959 ntBASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 OR4C14P-201ENST00000440929 923 ntBASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RIMBP3Q9UFD9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 OR7E115P-201ENST00000382617 1024 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 HNRNPA1P59-201ENST00000430583 918 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 ST13P19-201ENST00000442505 1124 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 AC099328.1-201ENST00000498809 1030 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 RN7SL556P-201ENST00000582856 298 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 AC013726.1-201ENST00000563747 2285 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 SHMT1P1-201ENST00000419974 1312 ntBASIC23.13■■□□□ 1.29
RIMBP3Q9UFD9 AL513523.2-202ENST00000427283 2040 ntBASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
RIMBP3Q9UFD9 MIR181D-201ENST00000384853 137 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 RN7SKP212-201ENST00000410851 328 ntBASIC23.11■■□□□ 1.29
RIMBP3Q9UFD9 FAM21EP-201ENST00000417804 985 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms