Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 AL138799.1-201ENST00000448213 1675 ntBASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 FAM197Y7-201ENST00000432892 766 ntBASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 AC145423.3-201ENST00000615987 467 ntBASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC6Q9UBN7 AC087481.3-201ENST00000602886 1894 ntBASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AC078819.1-201ENST00000547454 765 ntBASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AC012085.1-201ENST00000548270 765 ntBASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC6Q9UBN7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 FAM45BP-202ENST00000592932 1624 ntBASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 AC006001.1-201ENST00000325130 474 ntBASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms