Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 AP001258.2-201ENST00000529891 490 ntBASIC15.79■□□□□ 0.12
HPS4Q9NQG7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 EEF1DP1-201ENST00000585891 896 ntBASIC15.79■□□□□ 0.12
HPS4Q9NQG7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 AL603832.2-201ENST00000566195 2125 ntBASIC15.79■□□□□ 0.12
HPS4Q9NQG7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HPS4Q9NQG7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 TPM3P8-201ENST00000330554 643 ntBASIC15.78■□□□□ 0.12
HPS4Q9NQG7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AL139094.1-201ENST00000405549 1188 ntBASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 DBET-201ENST00000630918 3363 ntBASIC15.78■□□□□ 0.12
HPS4Q9NQG7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AC007787.1-201ENST00000588095 1583 ntBASIC15.78■□□□□ 0.12
HPS4Q9NQG7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AL354989.2-201ENST00000435838 1540 ntBASIC15.78■□□□□ 0.12
HPS4Q9NQG7 AC015818.8-201ENST00000587907 1519 ntBASIC15.78■□□□□ 0.12
HPS4Q9NQG7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HPS4Q9NQG7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.77■□□□□ 0.12
HPS4Q9NQG7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms