Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 AC013726.1-201ENST00000563747 2285 ntBASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 REXO1L2P-201ENST00000425429 2069 ntBASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 AC008723.1-201ENST00000506922 207 ntBASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 GCOM2-201ENST00000509133 1104 ntBASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 MIR4522-201ENST00000584932 87 ntBASIC15.74■□□□□ 0.11
PLXNA4Q9HCM2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 LILRP1-201ENST00000444199 1370 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ZBED1P1-201ENST00000502364 1930 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC025271.4-201ENST00000621477 1726 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC046158.3-201ENST00000624947 2558 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 KRT18P9-201ENST00000604826 1300 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AL583805.1-201ENST00000391389 531 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AP002803.1-201ENST00000528836 498 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 AC133540.1-201ENST00000620845 1019 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 FAM90A2P-201ENST00000511144 1395 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 FAM90A25P-201ENST00000528404 1395 ntBASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PLXNA4Q9HCM2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 AC013268.4-201ENST00000637413 2228 ntBASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 DUTP3-201ENST00000450025 415 ntBASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.72■□□□□ 0.11
PLXNA4Q9HCM2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms