Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 CDCA4P4-201ENST00000435216 680 ntBASIC13.79□□□□□ -0.2
CHD8Q9HCK8 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 AC005915.1-201ENST00000624912 2018 ntBASIC13.79□□□□□ -0.2
CHD8Q9HCK8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC006122.1-201ENST00000493323 440 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 IGHV1-12-201ENST00000518307 205 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC087072.1-201ENST00000603727 421 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 PGAM1P11-201ENST00000416729 680 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AL954722.1-201ENST00000431238 259 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 XBP1P1-201ENST00000436573 652 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 ERP29P1-201ENST00000442902 706 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AL022334.2-201ENST00000610000 484 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 CSTP2-201ENST00000610599 398 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC141586.5-201ENST00000624546 2050 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 MED15P3-201ENST00000413613 326 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC025186.1-201ENST00000478174 870 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC13.78□□□□□ -0.2
CHD8Q9HCK8 AL357143.1-203ENST00000639750 881 ntBASIC13.78□□□□□ -0.2
CHD8Q9HCK8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHD8Q9HCK8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms