Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 AC245100.3-201ENST00000441281 285 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 CROCCP4-201ENST00000457096 498 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ACA64.2-201ENST00000459014 129 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 KRT90P-201ENST00000549264 1064 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ENPP7P14-201ENST00000621765 1040 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 TCAF2P1-201ENST00000291129 2421 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ACE3P-201ENST00000423435 1973 ntBASIC17.93■□□□□ 0.46
RNF41Q9H4P4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 AC026434.2-201ENST00000506094 1078 ntBASIC17.92■□□□□ 0.46
RNF41Q9H4P4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.92■□□□□ 0.46
RNF41Q9H4P4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF41Q9H4P4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 TSPY26P-202ENST00000565928 3884 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 OR8S1-201ENST00000310194 1080 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 TPM3P8-201ENST00000330554 643 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 ARSEP1-201ENST00000420443 635 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF41Q9H4P4 CNN2P8-201ENST00000421872 913 ntBASIC17.91■□□□□ 0.46
RNF41Q9H4P4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms