Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 RNVU1-8-201ENST00000364272 125 ntBASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 RN7SKP212-201ENST00000410851 328 ntBASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 HLA-K-203ENST00000430151 1046 ntBASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 AC079325.1-201ENST00000430386 857 ntBASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 CICP12-201ENST00000455801 843 ntBASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 MIR4459-201ENST00000581837 66 ntBASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL25A1Q9BXS0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL25A1Q9BXS0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.96□□□□□ -0.02
COL25A1Q9BXS0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 MIR645-201ENST00000385283 94 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 FDPSP7-201ENST00000429043 1054 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 OR4C14P-201ENST00000440929 923 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 AC099343.1-201ENST00000513481 609 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 AP003040.1-201ENST00000532044 1024 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 CDC37P2-201ENST00000562287 1029 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 PRR20FP-201ENST00000603320 180 ntBASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.95□□□□□ -0.02
COL25A1Q9BXS0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 AC127383.1-201ENST00000444697 1800 ntBASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL25A1Q9BXS0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms