Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 RPL37AP1-201ENST00000412502 279 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 CNN2P2-201ENST00000443536 909 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 CNN2P3-201ENST00000450201 906 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AP001160.2-201ENST00000596071 487 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AL136317.3-201ENST00000618497 906 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AGAP7P-201ENST00000582299 2062 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 AGAP14-201ENST00000624701 2060 ntBASIC12.21□□□□□ -0.45
CHRDL1Q9BU40 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHRDL1Q9BU40 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 TARDBPP1-201ENST00000442013 1203 ntBASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 AC025678.2-201ENST00000562061 970 ntBASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 MIR6069-201ENST00000620069 79 ntBASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.2□□□□□ -0.46
CHRDL1Q9BU40 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms