Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PTPN18Q99952 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN18Q99952 DUTP3-201ENST00000450025 415 ntBASIC17.14■□□□□ 0.33
PTPN18Q99952 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 ALG3P1-201ENST00000508806 1114 ntBASIC17.14■□□□□ 0.33
PTPN18Q99952 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 AL022344.2-201ENST00000568976 968 ntBASIC17.14■□□□□ 0.33
PTPN18Q99952 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.14■□□□□ 0.33
PTPN18Q99952 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.14■□□□□ 0.33
PTPN18Q99952 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PTPN18Q99952 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN18Q99952 AP001184.1-201ENST00000637936 376 ntBASIC17.14■□□□□ 0.33
PTPN18Q99952 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 LINC02199-201ENST00000506655 2702 ntBASIC17.14■□□□□ 0.33
PTPN18Q99952 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.14■□□□□ 0.33
PTPN18Q99952 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN18Q99952 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN18Q99952 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTPN18Q99952 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN18Q99952 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN18Q99952 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTPN18Q99952 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN18Q99952 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN18Q99952 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTPN18Q99952 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN18Q99952 AP003398.1-201ENST00000531124 318 ntBASIC17.13■□□□□ 0.33
PTPN18Q99952 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.13■□□□□ 0.33
PTPN18Q99952 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.13■□□□□ 0.33
PTPN18Q99952 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PTPN18Q99952 BX088702.1-201ENST00000610784 235 ntBASIC17.13■□□□□ 0.33
PTPN18Q99952 AC087392.5-201ENST00000612517 489 ntBASIC17.13■□□□□ 0.33
PTPN18Q99952 AC092299.1-201ENST00000632679 757 ntBASIC17.13■□□□□ 0.33
PTPN18Q99952 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PTPN18Q99952 KRT18P9-201ENST00000604826 1300 ntBASIC17.13■□□□□ 0.33
PTPN18Q99952 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN18Q99952 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN18Q99952 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PTPN18Q99952 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PTPN18Q99952 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN18Q99952 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN18Q99952 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 AC024909.3-201ENST00000611513 2257 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN18Q99952 AL357563.1-201ENST00000404728 395 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN18Q99952 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 XBP1P1-201ENST00000436573 652 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN18Q99952 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTPN18Q99952 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 ALG1L13P-202ENST00000519320 584 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 MIR5196-201ENST00000578146 115 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 MIR3188-201ENST00000583494 85 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 AC005041.3-201ENST00000606287 649 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 AC138466.4-201ENST00000623965 852 ntBASIC17.12■□□□□ 0.33
PTPN18Q99952 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN18Q99952 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN18Q99952 AC010491.1-201ENST00000563101 2797 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms