Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 AC023310.1-201ENST00000554836 735 ntBASIC15.91■□□□□ 0.14
SMOQ99835 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.91■□□□□ 0.14
SMOQ99835 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.91■□□□□ 0.14
SMOQ99835 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.91■□□□□ 0.14
SMOQ99835 AL033527.4-201ENST00000641026 673 ntBASIC15.91■□□□□ 0.14
SMOQ99835 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SMOQ99835 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SMOQ99835 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
SMOQ99835 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SMOQ99835 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 TCAF2P1-201ENST00000291129 2421 ntBASIC15.9■□□□□ 0.14
SMOQ99835 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.9■□□□□ 0.14
SMOQ99835 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SMOQ99835 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.9■□□□□ 0.14
SMOQ99835 FAM8A4P-201ENST00000435433 1213 ntBASIC15.9■□□□□ 0.14
SMOQ99835 AL391280.1-201ENST00000506969 1062 ntBASIC15.9■□□□□ 0.14
SMOQ99835 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.9■□□□□ 0.14
SMOQ99835 RNA5SP412-201ENST00000516234 123 ntBASIC15.9■□□□□ 0.14
SMOQ99835 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 AC106820.3-201ENST00000561653 397 ntBASIC15.9■□□□□ 0.14
SMOQ99835 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.9■□□□□ 0.14
SMOQ99835 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.9■□□□□ 0.14
SMOQ99835 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.9■□□□□ 0.14
SMOQ99835 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.9■□□□□ 0.14
SMOQ99835 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.9■□□□□ 0.14
SMOQ99835 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 AC011270.2-201ENST00000624293 2550 ntBASIC15.9■□□□□ 0.14
SMOQ99835 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SMOQ99835 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SMOQ99835 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMOQ99835 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMOQ99835 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 FTLP10-202ENST00000505798 471 ntBASIC15.89■□□□□ 0.13
SMOQ99835 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.89■□□□□ 0.13
SMOQ99835 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SMOQ99835 C2orf69P2-201ENST00000562032 1123 ntBASIC15.89■□□□□ 0.13
SMOQ99835 DUX4L45-201ENST00000566406 1057 ntBASIC15.89■□□□□ 0.13
SMOQ99835 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SMOQ99835 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.89■□□□□ 0.13
SMOQ99835 OR10B1P-201ENST00000601666 907 ntBASIC15.89■□□□□ 0.13
SMOQ99835 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SMOQ99835 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms