Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NPAS2Q99743 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS2Q99743 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.01□□□□□ -0.01
NPAS2Q99743 AC009477.1-201ENST00000452936 217 ntBASIC15.01□□□□□ -0.01
NPAS2Q99743 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.01□□□□□ -0.01
NPAS2Q99743 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS2Q99743 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS2Q99743 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.01□□□□□ -0.01
NPAS2Q99743 AL079307.3-201ENST00000556114 283 ntBASIC15.01□□□□□ -0.01
NPAS2Q99743 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS2Q99743 AL844908.2-201ENST00000609461 460 ntBASIC15.01□□□□□ -0.01
NPAS2Q99743 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPAS2Q99743 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS2Q99743 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS2Q99743 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NPAS2Q99743 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS2Q99743 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 AC027601.5-201ENST00000624065 2482 ntBASIC15□□□□□ -0.01
NPAS2Q99743 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 AL607033.1-201ENST00000623900 1599 ntBASIC15□□□□□ -0.01
NPAS2Q99743 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPAS2Q99743 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15□□□□□ -0.01
NPAS2Q99743 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15□□□□□ -0.01
NPAS2Q99743 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 COX20P2-201ENST00000452636 358 ntBASIC15□□□□□ -0.01
NPAS2Q99743 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15□□□□□ -0.01
NPAS2Q99743 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPAS2Q99743 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15□□□□□ -0.01
NPAS2Q99743 AC008761.3-201ENST00000624803 892 ntBASIC15□□□□□ -0.01
NPAS2Q99743 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPAS2Q99743 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15□□□□□ -0.01
NPAS2Q99743 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS2Q99743 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NPAS2Q99743 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 AC022144.1-201ENST00000602255 1580 ntBASIC14.99□□□□□ -0.01
NPAS2Q99743 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NPAS2Q99743 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPAS2Q99743 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms