Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 BNIP3P29-201ENST00000598302 571 ntBASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 AC011447.5-201ENST00000616168 564 ntBASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDK5RAP1Q96SZ6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 TUBB1P2-201ENST00000422712 1306 ntBASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 TUBB1P1-201ENST00000503144 1300 ntBASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 AC022532.1-201ENST00000624563 1728 ntBASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 AL590640.2-201ENST00000457038 527 ntBASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 AC010328.2-201ENST00000597698 1111 ntBASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDK5RAP1Q96SZ6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 LILRP1-201ENST00000444199 1370 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AL157414.3-201ENST00000624276 1954 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 POM121L8P-201ENST00000417732 1281 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 FAM8A4P-201ENST00000435433 1213 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 POM121L9P-203ENST00000441984 1285 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 FTLP10-202ENST00000505798 471 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AL583810.1-201ENST00000553344 1045 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC105917.1-201ENST00000506637 2539 ntBASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDK5RAP1Q96SZ6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms