Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 WASH4P-201ENST00000564273 1246 ntBASIC18.04■□□□□ 0.48
NEK1Q96PY6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 AC018529.2-202ENST00000611482 3087 ntBASIC18.03■□□□□ 0.48
NEK1Q96PY6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 GK-202ENST00000378941 458 ntTSL 3 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 AL139094.1-201ENST00000405549 1188 ntBASIC18.03■□□□□ 0.48
NEK1Q96PY6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 TP53TG3HP-202ENST00000569755 579 ntBASIC18.03■□□□□ 0.48
NEK1Q96PY6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 WFDC1-204ENST00000613603 549 ntBASIC18.03■□□□□ 0.48
NEK1Q96PY6 AC005252.2-201ENST00000624630 1141 ntBASIC18.03■□□□□ 0.48
NEK1Q96PY6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
NEK1Q96PY6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 AC007686.3-201ENST00000619017 3487 ntBASIC18.03■□□□□ 0.48
NEK1Q96PY6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEK1Q96PY6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEK1Q96PY6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.02■□□□□ 0.48
NEK1Q96PY6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms