Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 WASH6P-202ENST00000359512 1437 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AL078644.1-201ENST00000609881 752 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AL390755.1-201ENST00000623716 2027 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 AKR1C7P-201ENST00000305623 895 ntBASIC11.62□□□□□ -0.55
AP1S3Q96PC3 RPS2P28-201ENST00000314255 741 ntBASIC11.62□□□□□ -0.55
AP1S3Q96PC3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 PRSS29P-201ENST00000440800 595 ntBASIC11.62□□□□□ -0.55
AP1S3Q96PC3 FAM210CP-201ENST00000445714 574 ntBASIC11.62□□□□□ -0.55
AP1S3Q96PC3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 AC004790.2-201ENST00000623588 572 ntBASIC11.62□□□□□ -0.55
AP1S3Q96PC3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms