Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 AC009093.7-201ENST00000623853 1223 ntBASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHAMP1Q96JM3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CHAMP1Q96JM3 CICP16-201ENST00000502609 2813 ntBASIC17.71■□□□□ 0.42
CHAMP1Q96JM3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHAMP1Q96JM3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHAMP1Q96JM3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHAMP1Q96JM3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 AP006288.1-201ENST00000446065 395 ntBASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.7■□□□□ 0.42
CHAMP1Q96JM3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 AL109936.8-201ENST00000641772 604 ntBASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 AC015802.1-201ENST00000588104 1449 ntBASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHAMP1Q96JM3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms