Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.56□□□□□ -0.08
NMD3Q96D46 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NMD3Q96D46 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.56□□□□□ -0.08
NMD3Q96D46 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NMD3Q96D46 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.56□□□□□ -0.08
NMD3Q96D46 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.56□□□□□ -0.08
NMD3Q96D46 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 CICP11-201ENST00000434745 2827 ntBASIC14.56□□□□□ -0.08
NMD3Q96D46 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 AC152010.1-201ENST00000415779 2006 ntBASIC14.56□□□□□ -0.08
NMD3Q96D46 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NMD3Q96D46 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.56□□□□□ -0.08
NMD3Q96D46 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.56□□□□□ -0.08
NMD3Q96D46 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
NMD3Q96D46 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.55□□□□□ -0.08
NMD3Q96D46 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 AC099522.2-201ENST00000607001 744 ntBASIC14.55□□□□□ -0.08
NMD3Q96D46 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NMD3Q96D46 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NMD3Q96D46 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NMD3Q96D46 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NMD3Q96D46 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NMD3Q96D46 DMBT1P1-203ENST00000636837 4628 ntBASIC14.54□□□□□ -0.08
NMD3Q96D46 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NMD3Q96D46 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NMD3Q96D46 KRT18P34-201ENST00000488218 1270 ntBASIC14.54□□□□□ -0.08
NMD3Q96D46 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.54□□□□□ -0.08
NMD3Q96D46 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms