Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0A1Q93050 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A1Q93050 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A1Q93050 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A1Q93050 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 AC132872.4-202ENST00000622924 2756 ntBASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 HYMAI-201ENST00000635591 3347 ntBASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 AC023024.2-201ENST00000623561 1993 ntBASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ATP6V0A1Q93050 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 REXO1L5P-201ENST00000622260 2098 ntBASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 AL354989.2-201ENST00000435838 1540 ntBASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 AC007969.1-201ENST00000433675 447 ntBASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A1Q93050 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AP001258.2-201ENST00000529891 490 ntBASIC17■□□□□ 0.31
ATP6V0A1Q93050 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AL139099.5-201ENST00000635274 300 ntBASIC17■□□□□ 0.31
ATP6V0A1Q93050 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms