Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 REXO1L2P-201ENST00000425429 2069 ntBASIC13.38□□□□□ -0.27
CPEB3Q8NE35 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 AC012508.2-201ENST00000567613 1472 ntBASIC13.38□□□□□ -0.27
CPEB3Q8NE35 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 WASH3P-207ENST00000560956 1394 ntBASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 C1QBPP1-201ENST00000400117 770 ntBASIC13.38□□□□□ -0.27
CPEB3Q8NE35 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 TNRC18P2-201ENST00000417666 2714 ntBASIC13.38□□□□□ -0.27
CPEB3Q8NE35 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CPEB3Q8NE35 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 LINC00528-201ENST00000600723 2160 ntBASIC13.37□□□□□ -0.27
CPEB3Q8NE35 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.37□□□□□ -0.27
CPEB3Q8NE35 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 COX20P2-201ENST00000452636 358 ntBASIC13.37□□□□□ -0.27
CPEB3Q8NE35 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 AC133539.2-201ENST00000604757 467 ntBASIC13.37□□□□□ -0.27
CPEB3Q8NE35 LINC02084-201ENST00000606069 1096 ntBASIC13.37□□□□□ -0.27
CPEB3Q8NE35 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 WFDC1-204ENST00000613603 549 ntBASIC13.37□□□□□ -0.27
CPEB3Q8NE35 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CPEB3Q8NE35 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms