Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 AP000845.1-201ENST00000581677 2131 ntBASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SIMC1Q8NDZ2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 FAM207CP-201ENST00000443486 507 ntBASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 AC004233.3-201ENST00000607794 1269 ntBASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 REXO1L2P-201ENST00000425429 2069 ntBASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SIMC1Q8NDZ2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SIMC1Q8NDZ2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms