Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 AC025181.2-201ENST00000606994 802 ntBASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 AL390754.1-201ENST00000619088 582 ntBASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ZNF439Q8NDP4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 AC104457.1-201ENST00000401024 814 ntBASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 AC004890.2-204ENST00000481968 304 ntBASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 AL390955.2-201ENST00000603032 514 ntBASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 AC093512.1-201ENST00000617969 520 ntBASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF439Q8NDP4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms