Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 AC106881.1-201ENST00000605849 3329 ntBASIC15.56■□□□□ 0.08
KDM1BQ8NB78 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 YBX1P6-201ENST00000442962 1002 ntBASIC15.56■□□□□ 0.08
KDM1BQ8NB78 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 RNA5SP486-201ENST00000515961 83 ntBASIC15.56■□□□□ 0.08
KDM1BQ8NB78 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 MIR6799-201ENST00000620297 69 ntBASIC15.56■□□□□ 0.08
KDM1BQ8NB78 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM1BQ8NB78 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 FER1L4-210ENST00000615531 5998 ntBASIC15.55■□□□□ 0.08
KDM1BQ8NB78 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 AL158070.2-201ENST00000623713 1621 ntBASIC15.55■□□□□ 0.08
KDM1BQ8NB78 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KDM1BQ8NB78 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
KDM1BQ8NB78 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
KDM1BQ8NB78 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KDM1BQ8NB78 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KDM1BQ8NB78 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KDM1BQ8NB78 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms