Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.04■□□□□ -0
TRIM48Q8IWZ4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 MIR658-201ENST00000385210 100 ntBASIC15.04■□□□□ -0
TRIM48Q8IWZ4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 AC093433.1-201ENST00000458048 571 ntBASIC15.04■□□□□ -0
TRIM48Q8IWZ4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 AL512343.1-201ENST00000605837 169 ntBASIC15.04■□□□□ -0
TRIM48Q8IWZ4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.04■□□□□ -0
TRIM48Q8IWZ4 RPSAP52-203ENST00000622976 1023 ntBASIC15.04■□□□□ -0
TRIM48Q8IWZ4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AC005229.1-201ENST00000392885 409 ntBASIC15.03■□□□□ -0
TRIM48Q8IWZ4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AC079776.1-201ENST00000401540 1152 ntBASIC15.03■□□□□ -0
TRIM48Q8IWZ4 RPL5P21-201ENST00000404620 815 ntBASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AC012441.1-201ENST00000446669 685 ntBASIC15.03■□□□□ -0
TRIM48Q8IWZ4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.03■□□□□ -0
TRIM48Q8IWZ4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 ACKR1-201ENST00000368121 1240 ntBASIC15.02■□□□□ -0
TRIM48Q8IWZ4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms