Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 AC007686.3-201ENST00000619017 3487 ntBASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL3Q8IVW4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AC093525.8-201ENST00000624099 1342 ntBASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AL353779.1-201ENST00000434793 351 ntBASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 RPL13AP25-201ENST00000484130 612 ntBASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AC026410.3-201ENST00000514280 936 ntBASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AC006538.3-201ENST00000612495 578 ntBASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 AC004790.1-201ENST00000612686 536 ntBASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKL3Q8IVW4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AL009178.2-201ENST00000597278 2719 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 VDAC1P7-201ENST00000462417 847 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 RN7SL399P-201ENST00000471648 279 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC023310.3-201ENST00000557027 670 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC100756.1-201ENST00000562736 682 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC138749.3-201ENST00000567691 622 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC116165.1-201ENST00000611806 668 ntBASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 345.3 ms