Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC055876.2-201ENST00000531834 546 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 WASH4P-201ENST00000564273 1246 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 AL365330.1-201ENST00000607459 531 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 AL109936.8-201ENST00000641772 604 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.21□□□□□ -0.78
SCXQ7RTU7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCXQ7RTU7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.78
SCXQ7RTU7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 DGCR5-201ENST00000399539 862 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SLC7A15P-201ENST00000424028 1363 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 RN7SL752P-201ENST00000463779 287 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms