Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AC020914.3-201ENST00000594712 304 ntBASIC19.07■□□□□ 0.64
COPS6Q7L5N1 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 AC023090.2-201ENST00000625182 2110 ntBASIC19.07■□□□□ 0.64
COPS6Q7L5N1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COPS6Q7L5N1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 SERPINA13P-202ENST00000478994 924 ntBASIC19.06■□□□□ 0.64
COPS6Q7L5N1 AL136301.1-201ENST00000615830 422 ntBASIC19.06■□□□□ 0.64
COPS6Q7L5N1 AC022748.3-201ENST00000621828 275 ntBASIC19.06■□□□□ 0.64
COPS6Q7L5N1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS6Q7L5N1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 AC005077.2-201ENST00000449786 690 ntBASIC19.05■□□□□ 0.64
COPS6Q7L5N1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 AL162727.3-201ENST00000635661 2787 ntBASIC19.05■□□□□ 0.64
COPS6Q7L5N1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS6Q7L5N1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS6Q7L5N1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms