Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 RPS9P1-201ENST00000419943 583 ntBASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AL109837.1-201ENST00000603272 613 ntBASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 YRDCP1-201ENST00000621419 643 ntBASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AC027601.3-201ENST00000622907 509 ntBASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AC010491.1-201ENST00000563101 2797 ntBASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 AC003102.2-201ENST00000589195 1469 ntBASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CNKSR3Q6P9H4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC105250.1-201ENST00000509378 2057 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 CAP2P1-201ENST00000557743 1390 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 RPL8P2-201ENST00000430538 502 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC026320.2-201ENST00000434379 478 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AL157407.1-201ENST00000435784 904 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 RPL7P35-201ENST00000446943 740 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 CICP12-201ENST00000455801 843 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 FRMPD2B-201ENST00000431305 1347 ntBASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNKSR3Q6P9H4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNKSR3Q6P9H4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNKSR3Q6P9H4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AP000356.3-201ENST00000382243 753 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AC006122.1-201ENST00000493323 440 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 AP002803.1-201ENST00000528836 498 ntBASIC16.14■□□□□ 0.17
CNKSR3Q6P9H4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms