Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC025181.2-201ENST00000606994 802 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.65■□□□□ 0.1
CASC4Q6P4E1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AC107890.1-201ENST00000422478 521 ntBASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 SDHAP3-202ENST00000515467 728 ntBASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AL691403.2-201ENST00000618460 490 ntBASIC15.64■□□□□ 0.09
CASC4Q6P4E1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.64■□□□□ 0.09
CASC4Q6P4E1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASC4Q6P4E1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AL390755.1-201ENST00000623716 2027 ntBASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 CICP14-201ENST00000629111 2732 ntBASIC15.63■□□□□ 0.09
CASC4Q6P4E1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 FAM8A3P-201ENST00000427218 844 ntBASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AC011467.4-201ENST00000594891 528 ntBASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CASC4Q6P4E1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms