Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC023794.5-201ENST00000564380 2157 ntBASIC14.42□□□□□ -0.1
LPCAT4Q643R3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC024267.1-201ENST00000582320 895 ntBASIC14.42□□□□□ -0.1
LPCAT4Q643R3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.42□□□□□ -0.1
LPCAT4Q643R3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC114271.1-201ENST00000612689 2813 ntBASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 AC012617.1-204ENST00000586340 2305 ntBASIC14.42□□□□□ -0.1
LPCAT4Q643R3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
LPCAT4Q643R3 CICP16-201ENST00000502609 2813 ntBASIC14.42□□□□□ -0.1
LPCAT4Q643R3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AC108073.2-201ENST00000464002 357 ntBASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AC022447.6-201ENST00000515522 438 ntBASIC14.41□□□□□ -0.1
LPCAT4Q643R3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 AC007787.1-201ENST00000588095 1583 ntBASIC14.41□□□□□ -0.1
LPCAT4Q643R3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LPCAT4Q643R3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms