Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.89■□□□□ 0.93
CDCA8Q53HL2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDCA8Q53HL2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AL136309.1-201ENST00000403917 691 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AP003171.2-201ENST00000528208 925 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 RN7SL560P-201ENST00000577943 264 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 EEF1DP1-201ENST00000585891 896 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC073413.1-201ENST00000603927 732 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC023090.2-201ENST00000625182 2110 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 ACE3P-201ENST00000423435 1973 ntBASIC20.88■□□□□ 0.93
CDCA8Q53HL2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDCA8Q53HL2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 AL138725.1-201ENST00000407347 1314 ntBASIC20.87■□□□□ 0.93
CDCA8Q53HL2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDCA8Q53HL2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 RN7SKP175-201ENST00000408472 289 ntBASIC20.86■□□□□ 0.93
CDCA8Q53HL2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 AC007969.1-201ENST00000433675 447 ntBASIC20.86■□□□□ 0.93
CDCA8Q53HL2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDCA8Q53HL2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms