Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC022137.2-201ENST00000503482 481 ntBASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 AC018529.2-202ENST00000611482 3087 ntBASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PTPN20Q4JDL3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 AC098614.1-201ENST00000368528 745 ntBASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ACTBP8-201ENST00000403258 1108 ntBASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 RN7SL837P-201ENST00000463010 287 ntBASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 RN7SL692P-201ENST00000464677 288 ntBASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 MIR5189-201ENST00000577370 114 ntBASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 AC010319.3-201ENST00000597028 470 ntBASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN20Q4JDL3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16■□□□□ 0.15
PTPN20Q4JDL3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16■□□□□ 0.15
PTPN20Q4JDL3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN20Q4JDL3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms