Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
IRX3P78415 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IRX3P78415 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 FNTAP2-201ENST00000430308 634 ntBASIC17.8■□□□□ 0.44
IRX3P78415 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.8■□□□□ 0.44
IRX3P78415 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.8■□□□□ 0.44
IRX3P78415 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.8■□□□□ 0.44
IRX3P78415 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.8■□□□□ 0.44
IRX3P78415 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX3P78415 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX3P78415 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.8■□□□□ 0.44
IRX3P78415 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
IRX3P78415 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.8■□□□□ 0.44
IRX3P78415 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
IRX3P78415 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX3P78415 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
IRX3P78415 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX3P78415 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.79■□□□□ 0.44
IRX3P78415 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
IRX3P78415 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
IRX3P78415 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.79■□□□□ 0.44
IRX3P78415 AC004066.1-201ENST00000502488 802 ntBASIC17.79■□□□□ 0.44
IRX3P78415 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX3P78415 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.79■□□□□ 0.44
IRX3P78415 AC106872.11-201ENST00000605838 421 ntBASIC17.79■□□□□ 0.44
IRX3P78415 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.79■□□□□ 0.44
IRX3P78415 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 ENPP7P14-201ENST00000621765 1040 ntBASIC17.79■□□□□ 0.44
IRX3P78415 PRSS30P-206ENST00000641773 873 ntBASIC17.79■□□□□ 0.44
IRX3P78415 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
IRX3P78415 FAM45BP-202ENST00000592932 1624 ntBASIC17.79■□□□□ 0.44
IRX3P78415 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX3P78415 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX3P78415 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX3P78415 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
IRX3P78415 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IRX3P78415 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 TNRC18P2-201ENST00000417666 2714 ntBASIC17.78■□□□□ 0.44
IRX3P78415 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms