Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 FTLP10-202ENST00000505798 471 ntBASIC13.11□□□□□ -0.31
ABCA4P78363 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.11□□□□□ -0.31
ABCA4P78363 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.11□□□□□ -0.31
ABCA4P78363 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.11□□□□□ -0.31
ABCA4P78363 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ABCA4P78363 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ABCA4P78363 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ABCA4P78363 AC004899.1-201ENST00000424687 1714 ntBASIC13.11□□□□□ -0.31
ABCA4P78363 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ABCA4P78363 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ABCA4P78363 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ABCA4P78363 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ABCA4P78363 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.11□□□□□ -0.31
ABCA4P78363 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ABCA4P78363 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.1□□□□□ -0.31
ABCA4P78363 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 PCDHA1-201ENST00000378133 2726 ntBASIC13.1□□□□□ -0.31
ABCA4P78363 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ABCA4P78363 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 AL645937.2-201ENST00000396808 931 ntBASIC13.1□□□□□ -0.31
ABCA4P78363 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.1□□□□□ -0.31
ABCA4P78363 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.1□□□□□ -0.31
ABCA4P78363 MIR4683-201ENST00000579659 81 ntBASIC13.1□□□□□ -0.31
ABCA4P78363 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.1□□□□□ -0.31
ABCA4P78363 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA4P78363 DBET-201ENST00000630918 3363 ntBASIC13.1□□□□□ -0.31
ABCA4P78363 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA4P78363 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA4P78363 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA4P78363 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 KRT8P4-201ENST00000509735 1454 ntBASIC13.09□□□□□ -0.31
ABCA4P78363 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA4P78363 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA4P78363 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.09□□□□□ -0.31
ABCA4P78363 GHSR-202ENST00000427970 912 ntBASIC13.09□□□□□ -0.31
ABCA4P78363 EEF1DP6-201ENST00000449232 372 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms