Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
VSX2P58304 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VSX2P58304 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VSX2P58304 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 AC005229.1-201ENST00000392885 409 ntBASIC14.63□□□□□ -0.07
VSX2P58304 AC079776.1-201ENST00000401540 1152 ntBASIC14.63□□□□□ -0.07
VSX2P58304 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.63□□□□□ -0.07
VSX2P58304 AC106760.1-201ENST00000508690 800 ntBASIC14.63□□□□□ -0.07
VSX2P58304 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.63□□□□□ -0.07
VSX2P58304 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
VSX2P58304 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VSX2P58304 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VSX2P58304 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 PPT1-215ENST00000641471 2368 ntBASIC14.62□□□□□ -0.07
VSX2P58304 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.62□□□□□ -0.07
VSX2P58304 KLF2P2-201ENST00000416807 1039 ntBASIC14.62□□□□□ -0.07
VSX2P58304 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.62□□□□□ -0.07
VSX2P58304 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.62□□□□□ -0.07
VSX2P58304 ACA64.2-201ENST00000459014 129 ntBASIC14.62□□□□□ -0.07
VSX2P58304 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.62□□□□□ -0.07
VSX2P58304 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 IGHV3-71-201ENST00000523324 359 ntBASIC14.62□□□□□ -0.07
VSX2P58304 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.62□□□□□ -0.07
VSX2P58304 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.62□□□□□ -0.07
VSX2P58304 AL512343.1-201ENST00000605837 169 ntBASIC14.62□□□□□ -0.07
VSX2P58304 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.62□□□□□ -0.07
VSX2P58304 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 PCDHA3-202ENST00000532566 4594 ntBASIC14.62□□□□□ -0.07
VSX2P58304 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms