Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.35□□□□□ -0.59
CMC4P56277 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
CMC4P56277 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.35□□□□□ -0.59
CMC4P56277 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.35□□□□□ -0.59
CMC4P56277 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.35□□□□□ -0.59
CMC4P56277 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.35□□□□□ -0.59
CMC4P56277 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.35□□□□□ -0.59
CMC4P56277 RN7SL48P-201ENST00000579283 293 ntBASIC11.35□□□□□ -0.59
CMC4P56277 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.35□□□□□ -0.59
CMC4P56277 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.35□□□□□ -0.59
CMC4P56277 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.35□□□□□ -0.59
CMC4P56277 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.35□□□□□ -0.59
CMC4P56277 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CMC4P56277 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.35□□□□□ -0.59
CMC4P56277 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
CMC4P56277 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CMC4P56277 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 AC136621.1-201ENST00000624017 2304 ntBASIC11.34□□□□□ -0.59
CMC4P56277 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 TPM3P8-201ENST00000330554 643 ntBASIC11.34□□□□□ -0.59
CMC4P56277 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.34□□□□□ -0.59
CMC4P56277 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.34□□□□□ -0.59
CMC4P56277 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.34□□□□□ -0.59
CMC4P56277 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.34□□□□□ -0.59
CMC4P56277 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.34□□□□□ -0.59
CMC4P56277 AL162274.1-201ENST00000617191 1098 ntBASIC11.34□□□□□ -0.59
CMC4P56277 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CMC4P56277 AL035252.4-201ENST00000624174 288 ntBASIC11.34□□□□□ -0.59
CMC4P56277 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.34□□□□□ -0.59
CMC4P56277 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CMC4P56277 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CMC4P56277 AC023024.2-201ENST00000623561 1993 ntBASIC11.34□□□□□ -0.59
CMC4P56277 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
CMC4P56277 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
CMC4P56277 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
CMC4P56277 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
CMC4P56277 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.33□□□□□ -0.6
CMC4P56277 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CMC4P56277 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms