Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 AC074338.1-201ENST00000416825 156 ntBASIC14.28□□□□□ -0.12
CDH12P55289 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 AC069262.1-201ENST00000539058 672 ntBASIC14.28□□□□□ -0.12
CDH12P55289 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.28□□□□□ -0.12
CDH12P55289 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 AL596442.2-201ENST00000610240 980 ntBASIC14.28□□□□□ -0.12
CDH12P55289 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 LINC00628-201ENST00000628516 1289 ntBASIC14.28□□□□□ -0.12
CDH12P55289 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH12P55289 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CDH12P55289 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH12P55289 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH12P55289 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH12P55289 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH12P55289 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH12P55289 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.27□□□□□ -0.12
CDH12P55289 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.27□□□□□ -0.12
CDH12P55289 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
CDH12P55289 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH12P55289 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 RPL37AP1-201ENST00000412502 279 ntBASIC14.27□□□□□ -0.13
CDH12P55289 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.27□□□□□ -0.13
CDH12P55289 AC004967.1-201ENST00000453589 447 ntBASIC14.27□□□□□ -0.13
CDH12P55289 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH12P55289 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CDH12P55289 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH12P55289 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH12P55289 AL033527.5-202ENST00000641632 1098 ntBASIC14.27□□□□□ -0.13
CDH12P55289 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.27□□□□□ -0.13
CDH12P55289 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH12P55289 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH12P55289 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDH12P55289 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH12P55289 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDH12P55289 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms