Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
EPHB3P54753 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
EPHB3P54753 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.83■□□□□ 0.13
EPHB3P54753 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHB3P54753 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EPHB3P54753 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 FNTAP2-201ENST00000430308 634 ntBASIC15.83■□□□□ 0.12
EPHB3P54753 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHB3P54753 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHB3P54753 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.83■□□□□ 0.12
EPHB3P54753 AC100850.1-201ENST00000506768 649 ntBASIC15.83■□□□□ 0.12
EPHB3P54753 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHB3P54753 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.83■□□□□ 0.12
EPHB3P54753 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
EPHB3P54753 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 AP000593.2-201ENST00000542775 1433 ntBASIC15.83■□□□□ 0.12
EPHB3P54753 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
EPHB3P54753 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EPHB3P54753 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
EPHB3P54753 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHB3P54753 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EPHB3P54753 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EPHB3P54753 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.82■□□□□ 0.12
EPHB3P54753 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EPHB3P54753 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
EPHB3P54753 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.82■□□□□ 0.12
EPHB3P54753 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHB3P54753 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHB3P54753 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHB3P54753 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
EPHB3P54753 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 AC008894.3-201ENST00000624324 3103 ntBASIC15.81■□□□□ 0.12
EPHB3P54753 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
EPHB3P54753 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EPHB3P54753 AL354877.1-201ENST00000424412 413 ntBASIC15.81■□□□□ 0.12
EPHB3P54753 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 BX284668.4-201ENST00000453917 508 ntBASIC15.81■□□□□ 0.12
EPHB3P54753 AC021723.1-201ENST00000486306 515 ntBASIC15.81■□□□□ 0.12
EPHB3P54753 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.81■□□□□ 0.12
EPHB3P54753 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHB3P54753 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHB3P54753 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms