Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 AL157414.3-201ENST00000624276 1954 ntBASIC13.55□□□□□ -0.24
SLC25A1P53007 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SLC25A1P53007 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SLC25A1P53007 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SLC25A1P53007 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 HLA-K-203ENST00000430151 1046 ntBASIC13.55□□□□□ -0.24
SLC25A1P53007 AC009477.1-201ENST00000452936 217 ntBASIC13.55□□□□□ -0.24
SLC25A1P53007 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.55□□□□□ -0.24
SLC25A1P53007 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SLC25A1P53007 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.55□□□□□ -0.24
SLC25A1P53007 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
SLC25A1P53007 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
SLC25A1P53007 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC25A1P53007 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SLC25A1P53007 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.54□□□□□ -0.24
SLC25A1P53007 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SLC25A1P53007 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 AP001267.2-201ENST00000532619 2086 ntBASIC13.54□□□□□ -0.24
SLC25A1P53007 AC097376.2-205ENST00000610159 5334 ntBASIC13.54□□□□□ -0.24
SLC25A1P53007 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
SLC25A1P53007 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 TSSK5P-201ENST00000423978 907 ntBASIC13.54□□□□□ -0.24
SLC25A1P53007 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.54□□□□□ -0.24
SLC25A1P53007 AC241585.1-201ENST00000433527 519 ntBASIC13.54□□□□□ -0.24
SLC25A1P53007 FAM86GP-201ENST00000448322 971 ntBASIC13.54□□□□□ -0.24
SLC25A1P53007 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.54□□□□□ -0.24
SLC25A1P53007 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SLC25A1P53007 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SLC25A1P53007 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.54□□□□□ -0.24
SLC25A1P53007 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms