Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NKX2-5P52952 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-5P52952 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NKX2-5P52952 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-5P52952 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
NKX2-5P52952 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-5P52952 AC022447.6-201ENST00000515522 438 ntBASIC12.96□□□□□ -0.33
NKX2-5P52952 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-5P52952 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 AC005336.2-201ENST00000593183 939 ntBASIC12.96□□□□□ -0.33
NKX2-5P52952 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 AC011467.4-201ENST00000594891 528 ntBASIC12.96□□□□□ -0.33
NKX2-5P52952 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX2-5P52952 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-5P52952 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-5P52952 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-5P52952 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.96□□□□□ -0.34
NKX2-5P52952 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-5P52952 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-5P52952 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
NKX2-5P52952 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-5P52952 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-5P52952 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NKX2-5P52952 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX2-5P52952 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 AC034232.1-201ENST00000506026 1064 ntBASIC12.95□□□□□ -0.34
NKX2-5P52952 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.95□□□□□ -0.34
NKX2-5P52952 KRT18P6-201ENST00000555540 1265 ntBASIC12.95□□□□□ -0.34
NKX2-5P52952 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.95□□□□□ -0.34
NKX2-5P52952 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.95□□□□□ -0.34
NKX2-5P52952 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 AC010653.2-201ENST00000623505 997 ntBASIC12.95□□□□□ -0.34
NKX2-5P52952 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX2-5P52952 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-5P52952 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-5P52952 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-5P52952 AL021155.1-201ENST00000438808 2637 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms