Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFC1P35251 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFC1P35251 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFC1P35251 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 AL138799.1-201ENST00000448213 1675 ntBASIC16.11■□□□□ 0.17
RFC1P35251 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFC1P35251 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC1P35251 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.11■□□□□ 0.17
RFC1P35251 AC013726.1-201ENST00000563747 2285 ntBASIC16.11■□□□□ 0.17
RFC1P35251 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC1P35251 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFC1P35251 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC1P35251 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC1P35251 AC098850.1-201ENST00000419919 790 ntBASIC16.11■□□□□ 0.17
RFC1P35251 DFFBP1-201ENST00000433250 979 ntBASIC16.11■□□□□ 0.17
RFC1P35251 FAM207CP-201ENST00000443486 507 ntBASIC16.11■□□□□ 0.17
RFC1P35251 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC1P35251 AC004066.1-201ENST00000502488 802 ntBASIC16.11■□□□□ 0.17
RFC1P35251 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.11■□□□□ 0.17
RFC1P35251 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.11■□□□□ 0.17
RFC1P35251 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.11■□□□□ 0.17
RFC1P35251 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.11■□□□□ 0.17
RFC1P35251 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC1P35251 CHCHD2P3-201ENST00000603038 451 ntBASIC16.11■□□□□ 0.17
RFC1P35251 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 AC008761.3-201ENST00000624803 892 ntBASIC16.11■□□□□ 0.17
RFC1P35251 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
RFC1P35251 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
RFC1P35251 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 FGD5P1-202ENST00000614866 2498 ntBASIC16.11■□□□□ 0.17
RFC1P35251 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RFC1P35251 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC1P35251 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC1P35251 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC1P35251 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
RFC1P35251 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RFC1P35251 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RFC1P35251 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RFC1P35251 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RFC1P35251 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFC1P35251 AC236430.1-201ENST00000402231 743 ntBASIC16.1■□□□□ 0.17
RFC1P35251 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 AC002472.2-201ENST00000442739 958 ntBASIC16.1■□□□□ 0.17
RFC1P35251 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC1P35251 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC1P35251 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC1P35251 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC1P35251 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC1P35251 AL132655.2-201ENST00000596276 594 ntBASIC16.1■□□□□ 0.17
RFC1P35251 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC1P35251 AC004233.3-201ENST00000607794 1269 ntBASIC16.1■□□□□ 0.17
RFC1P35251 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC1P35251 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC1P35251 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC1P35251 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC1P35251 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms